Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mma_2811Glucose-methanol-choline oxidoreductase. (506 aa)    
Predicted Functional Partners:
mma_2812
Esterase/lipase.
     
 0.640
betA
Choline dehydrogenase.
  
  
 
0.612
mma_0522
Uncharacterized conserved protein.
    
 0.493
mma_3449
TPR-domain containing protein.
    
 0.493
betT
High-affinity choline transport protein; Belongs to the BCCT transporter (TC 2.A.15) family.
  
  
 0.477
mma_1114
Transcription factor.
    
 0.456
mma_1688
Uncharacterized conserved protein; Ankyrin repeat containing protein.
    
 0.456
mma_1981
Uncharacterized conserved protein; Probable ankyrin repeat harboring signal peptide protein.
    
 0.456
ectB
Diaminobutyrate--pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.433
mma_2813
Pirin-like protein; Belongs to the pirin family.
       0.420
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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