STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mma_2833Uncharacterized conserved protein. (136 aa)    
Predicted Functional Partners:
mma_2832
Uncharacterized conserved protein.
 
     0.927
mma_2834
Uncharacterized conserved protein; Probable glycosyl transferase.
 
  
 0.915
mma_2835
Uncharacterized conserved protein.
 
   
 0.664
gtrB1
Glucosyl transferase.
 
  
 0.545
wcaA
Glycosyltransferase involved in cell wall biogenesis.
 
  
 0.539
gtrB2
Glucosyl transferase.
 
  
 0.534
gltB
Glutamate synthase (NADPH) large chain.
      
 0.407
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.