Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mma_3299ABC transport system ATP-binding protein. (267 aa)    
Predicted Functional Partners:
mma_3298
ABC transport system permease protein.
 
 0.998
mma_3297
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.995
mma_3241
ABC transport system permease protein.
 
 0.987
mma_3294
Uncharacterized conserved protein.
  
 0.971
mma_1957
ABC-type transport system, permease component.
  
 0.969
mma_3295
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 
 0.951
mma_1958
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.943
mma_3243
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.943
mma_3242
ABC transport system ATP-binding protein.
  
  
 
0.910
mma_0643
Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family.
   
 
 0.813
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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