Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lptAOstA-like protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. (184 aa)    
Predicted Functional Partners:
mma_3349
Uncharacterized conserved protein.
 
 
 0.993
mma_3351
ABC-type transport system, ATPase component.
  
  
 0.985
ostA
OstA organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
 
 0.864
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.820
kpsF
Polysialic acid capsule expression protein; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.801
mma_3348
Uncharacterized conserved protein; Putative low specificity phosphatase (HAD superfamily).
  
  
 0.794
flgC
FlgC flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.684
mma_2964
Exoribonuclease R.
  
     0.670
mma_0835
Uncharacterized conserved protein; Probable transmembrane protein.
  
     0.654
mma_3295
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
  
 0.650
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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