fecI16 protein (Janthinobacterium sp. Marseille)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

fecI16

RNA polymerase sigma-70 factor, ECF subfamily. (184 aa)

Predicted Functional Partners:

fecR16

0.954

fecR15

0.858

fecR1

0.806

fecR14

0.806

fecR3

0.805

fecR4

0.805

fecR6

0.805

fecR8

0.805

fecR9

0.805

fecR13

0.805

Your Current Organism:

Janthinobacterium sp. Marseille

NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fecI16	fecR1	mma_3497	mma_0755	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.806
fecI16	fecR13	mma_3497	mma_2587	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.805
fecI16	fecR14	mma_3497	mma_3484	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.806
fecI16	fecR15	mma_3497	mma_3492	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.858
fecI16	fecR16	mma_3497	mma_3496	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.954
fecI16	fecR3	mma_3497	mma_1214	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.805
fecI16	fecR4	mma_3497	mma_1234	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.805
fecI16	fecR6	mma_3497	mma_2023	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.805
fecI16	fecR8	mma_3497	mma_2029	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.805
fecI16	fecR9	mma_3497	mma_2351	RNA polymerase sigma-70 factor, ECF subfamily.	Fe2+-dicitrate sensor, membrane component.	0.805
fecR1	fecI16	mma_0755	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.806
fecR13	fecI16	mma_2587	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.805
fecR14	fecI16	mma_3484	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.806
fecR15	fecI16	mma_3492	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.858
fecR16	fecI16	mma_3496	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.954
fecR3	fecI16	mma_1214	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.805
fecR4	fecI16	mma_1234	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.805
fecR6	fecI16	mma_2023	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.805
fecR8	fecI16	mma_2029	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.805
fecR9	fecI16	mma_2351	mma_3497	Fe2+-dicitrate sensor, membrane component.	RNA polymerase sigma-70 factor, ECF subfamily.	0.805