Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| copA1 | mma_1714 | mma_0795 | mma_1714 | Copper resistance protein A. | Cation-translocating P-type ATPase. | 0.716 |
| copA1 | zntA2 | mma_0795 | mma_3525 | Copper resistance protein A. | Cation-translocating P-type ATPase. | 0.647 |
| cueR | merA | mma_3526 | mma_1749 | Cu(I)-responsive response regulator. | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.471 |
| cueR | mma_3528 | mma_3526 | mma_3528 | Cu(I)-responsive response regulator. | Heavy metal transport/detoxification protein. | 0.518 |
| cueR | zntA2 | mma_3526 | mma_3525 | Cu(I)-responsive response regulator. | Cation-translocating P-type ATPase. | 0.795 |
| frmR | merA | mma_1825 | mma_1749 | Uncharacterized conserved protein; Similar to FrmR (Escherichia coli). | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.471 |
| frmR | zntA2 | mma_1825 | mma_3525 | Uncharacterized conserved protein; Similar to FrmR (Escherichia coli). | Cation-translocating P-type ATPase. | 0.677 |
| merA | cueR | mma_1749 | mma_3526 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Cu(I)-responsive response regulator. | 0.471 |
| merA | frmR | mma_1749 | mma_1825 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Uncharacterized conserved protein; Similar to FrmR (Escherichia coli). | 0.471 |
| merA | merP | mma_1749 | mma_1751 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Mercuric transport periplasmic binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | 0.884 |
| merA | mma_1629 | mma_1749 | mma_1629 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Cation-translocating P-type ATPase. | 0.651 |
| merA | mma_1714 | mma_1749 | mma_1714 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Cation-translocating P-type ATPase. | 0.779 |
| merA | sodC | mma_1749 | mma_1690 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.939 |
| merA | zntA1 | mma_1749 | mma_1796 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Cation-translocating P-type ATPase. | 0.651 |
| merA | zntA2 | mma_1749 | mma_3525 | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Cation-translocating P-type ATPase. | 0.769 |
| merP | merA | mma_1751 | mma_1749 | Mercuric transport periplasmic binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.884 |
| merP | mma_1629 | mma_1751 | mma_1629 | Mercuric transport periplasmic binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | Cation-translocating P-type ATPase. | 0.575 |
| merP | mma_1714 | mma_1751 | mma_1714 | Mercuric transport periplasmic binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | Cation-translocating P-type ATPase. | 0.742 |
| merP | sodC | mma_1751 | mma_1690 | Mercuric transport periplasmic binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.841 |
| merP | zntA1 | mma_1751 | mma_1796 | Mercuric transport periplasmic binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | Cation-translocating P-type ATPase. | 0.575 |
page 1 of 3