Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mma_3530Uncharacterized conserved protein; GGDEF domain containing protein. (356 aa)    
Predicted Functional Partners:
mma_0962
GGDEF domain protein.
 
  
 0.793
mma_0763
Sensory box protein.
 
  
 0.790
mma_3234
Uncharacterized conserved protein; Putative phosphodiesterase.
  
   0.790
mma_0902
Uncharacterized conserved protein.
 
 
 0.649
mma_3610
Uncharacterized conserved protein.
 
 
   0.617
mma_1158
Uncharacterized conserved protein.
  
    0.599
mma_0960
Hypothetical protein.
 
 
0.531
mma_2615
Sensory box/GGDEF family protein.
 
 
0.512
mma_2141
Uncharacterized conserved protein.
 
 
0.491
mma_0597
Uncharacterized conserved protein.
 
 
0.480
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.