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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mma_3530Uncharacterized conserved protein; GGDEF domain containing protein. (356 aa)    
Predicted Functional Partners:
mma_0962
GGDEF domain protein.
 
  
 0.792
mma_3234
Uncharacterized conserved protein; Putative phosphodiesterase.
 
   0.791
mma_0763
Sensory box protein.
 
  
 0.789
mma_0902
Uncharacterized conserved protein.
 
 0.655
mma_3610
Uncharacterized conserved protein.
 
 
 0.625
mma_1158
Uncharacterized conserved protein.
  
    0.595
mma_2615
Sensory box/GGDEF family protein.
 
 
0.552
mma_0960
Hypothetical protein.
 
 
0.535
mma_0597
Uncharacterized conserved protein.
 
 
0.517
mma_1995
Uncharacterized conserved protein; Sensory box/GGDEF domain/EAL domain protein.
 
0.508
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.