Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mma_3535ABC-type transport systems, periplasmic component. (332 aa)    
Predicted Functional Partners:
mma_3536
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.951
ssuA1
Sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA.
     
  0.900
ssuA2
Sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA.
     
  0.900
tauA
ABC-type sulfonate/nitrate transport system substrate-binding protein.
     
  0.900
mma_2616
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
     
  0.900
mma_2619
Sulfonate/nitrate transport system substrate-binding protein.
     
  0.900
mma_3465
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
     
  0.900
mma_3537
ABC-type transport system, ATPase component.
 
 
 0.892
ssuE
NAD(P)H-dependent FMN reductase.
  
 
  0.731
ssuD1
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
   
 
 0.701
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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