STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mma_3536ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (255 aa)    
Predicted Functional Partners:
mma_3537
ABC-type transport system, ATPase component.
 
  
 0.959
mma_3535
ABC-type transport systems, periplasmic component.
 
  
 0.941
mma_3084
Sulfonate/nitrate transport system ATP-binding protein.
 
  
 0.834
mma_2618
Sulfonate/nitrate transport system ATP-binding protein.
 
  
 0.814
mma_3086
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
 
  
 0.802
mma_2619
Sulfonate/nitrate transport system substrate-binding protein.
 
  
 0.787
ssuA2
Sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA.
 
  
 0.786
mma_2616
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
 
  
 0.786
nasD
Nitrate transport system ATP-binding protein.
 
  
 0.783
mma_3465
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
 
  
 0.781
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.