STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
djlADnaJ-like protein, putative. (226 aa)    
Predicted Functional Partners:
RD1_2606
Conserved hypothetical protein.
  
 
 0.976
dnaK
Chaperone protein DnaK, putative; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.900
RD1_2036
Conserved hypothetical protein.
       0.773
RD1_2037
Acetyltransferase, putative.
       0.773
mutA
methylmalonyl-CoA mutase.
  
    0.765
RD1_2040
Hypothetical protein.
       0.728
hesB
HesB-like iron-sulfur cluster assembly protein, putative; Belongs to the HesB/IscA family.
  
 
 0.717
RD1_3168
FeS cluster assembly HesB family protein, putative; Belongs to the HesB/IscA family.
  
 
 0.717
nifS
Cysteine desulfurase.
  
 
 0.649
nifS-2
Cysteine desulfurase.
  
 
 0.649
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.