Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RD1_2528 | RD1_3342 | RD1_2528 | RD1_3342 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.402 |
RD1_3341 | RD1_3342 | RD1_3341 | RD1_3342 | Metallopeptidase, family M24, putative. | Conserved hypothetical protein. | 0.574 |
RD1_3341 | cobS-2 | RD1_3341 | RD1_3339 | Metallopeptidase, family M24, putative. | Aerobic cobaltochelatase CobS subunit. | 0.567 |
RD1_3341 | cobT | RD1_3341 | RD1_3340 | Metallopeptidase, family M24, putative. | Aerobic cobaltochelatase CobT subunit. | 0.688 |
RD1_3342 | RD1_2528 | RD1_3342 | RD1_2528 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.402 |
RD1_3342 | RD1_3341 | RD1_3342 | RD1_3341 | Conserved hypothetical protein. | Metallopeptidase, family M24, putative. | 0.574 |
RD1_3342 | RD1_4161 | RD1_3342 | RD1_4161 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.473 |
RD1_3342 | cobS-2 | RD1_3342 | RD1_3339 | Conserved hypothetical protein. | Aerobic cobaltochelatase CobS subunit. | 0.483 |
RD1_3342 | cobT | RD1_3342 | RD1_3340 | Conserved hypothetical protein. | Aerobic cobaltochelatase CobT subunit. | 0.689 |
RD1_4161 | RD1_3342 | RD1_4161 | RD1_3342 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.473 |
cobS-2 | RD1_3341 | RD1_3339 | RD1_3341 | Aerobic cobaltochelatase CobS subunit. | Metallopeptidase, family M24, putative. | 0.567 |
cobS-2 | RD1_3342 | RD1_3339 | RD1_3342 | Aerobic cobaltochelatase CobS subunit. | Conserved hypothetical protein. | 0.483 |
cobS-2 | cobT | RD1_3339 | RD1_3340 | Aerobic cobaltochelatase CobS subunit. | Aerobic cobaltochelatase CobT subunit. | 0.996 |
cobT | RD1_3341 | RD1_3340 | RD1_3341 | Aerobic cobaltochelatase CobT subunit. | Metallopeptidase, family M24, putative. | 0.688 |
cobT | RD1_3342 | RD1_3340 | RD1_3342 | Aerobic cobaltochelatase CobT subunit. | Conserved hypothetical protein. | 0.689 |
cobT | cobS-2 | RD1_3340 | RD1_3339 | Aerobic cobaltochelatase CobT subunit. | Aerobic cobaltochelatase CobS subunit. | 0.996 |