STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RD1_3382Conserved hypothetical protein. (659 aa)    
Predicted Functional Partners:
motA
Chemotaxis MotA protein.
  
 0.994
RD1_3383
Putative MotA/TolQ/ExbB proton channel family.
 
     0.959
RD1_3107
Probable regulator protein containing CheR-and CheB-like domains.
 
  
 0.943
motB
Chemotaxis protein MotB, putative.
     
 0.909
cheW
Chemotaxis protein CheW.
 
  
 0.891
flgC
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.889
cheA
Chemotaxis protein CheA.
 
  
 0.860
fliG
Flagellar motor switch protein FliG, putative.
 
  
 0.839
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.829
fliI
Flagellum-specific ATP synthase.
 
  
 0.807
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
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