Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RD1_1914 | RD1_3208 | RD1_1914 | RD1_3208 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.731 |
RD1_1914 | RD1_3428 | RD1_1914 | RD1_3428 | Lipoprotein, putative. | Hypothetical protein. | 0.564 |
RD1_2807 | RD1_3428 | RD1_2807 | RD1_3428 | Hypothetical protein. | Hypothetical protein. | 0.538 |
RD1_3089 | RD1_3208 | RD1_3089 | RD1_3208 | Hypothetical protein. | Conserved hypothetical protein. | 0.570 |
RD1_3089 | RD1_3428 | RD1_3089 | RD1_3428 | Hypothetical protein. | Hypothetical protein. | 0.563 |
RD1_3208 | RD1_1914 | RD1_3208 | RD1_1914 | Conserved hypothetical protein. | Lipoprotein, putative. | 0.731 |
RD1_3208 | RD1_3089 | RD1_3208 | RD1_3089 | Conserved hypothetical protein. | Hypothetical protein. | 0.570 |
RD1_3208 | RD1_3428 | RD1_3208 | RD1_3428 | Conserved hypothetical protein. | Hypothetical protein. | 0.576 |
RD1_3424 | RD1_3428 | RD1_3424 | RD1_3428 | LysE family protein. | Hypothetical protein. | 0.557 |
RD1_3424 | moaB | RD1_3424 | RD1_3423 | LysE family protein. | Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. | 0.781 |
RD1_3424 | plsY | RD1_3424 | RD1_3430 | LysE family protein. | Conserved hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.557 |
RD1_3424 | pyr | RD1_3424 | RD1_3429 | LysE family protein. | Dihydroorotase, multifunctional complex type. | 0.557 |
RD1_3424 | pyrB | RD1_3424 | RD1_3427 | LysE family protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.573 |
RD1_3424 | udgA | RD1_3424 | RD1_3425 | LysE family protein. | uracil-DNA glycosylase, C-terminal. | 0.875 |
RD1_3428 | RD1_1914 | RD1_3428 | RD1_1914 | Hypothetical protein. | Lipoprotein, putative. | 0.564 |
RD1_3428 | RD1_2807 | RD1_3428 | RD1_2807 | Hypothetical protein. | Hypothetical protein. | 0.538 |
RD1_3428 | RD1_3089 | RD1_3428 | RD1_3089 | Hypothetical protein. | Hypothetical protein. | 0.563 |
RD1_3428 | RD1_3208 | RD1_3428 | RD1_3208 | Hypothetical protein. | Conserved hypothetical protein. | 0.576 |
RD1_3428 | RD1_3424 | RD1_3428 | RD1_3424 | Hypothetical protein. | LysE family protein. | 0.557 |
RD1_3428 | moaB | RD1_3428 | RD1_3423 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. | 0.644 |
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