STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D3TN12_GLOMMSerine-arginine protein 55. (351 aa)    
Predicted Functional Partners:
A0A1B0FCN3
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 0.962
A0A1B0FDF7
Protein kinase domain-containing protein.
    
 0.942
A0A1B0FKC6
Protein kinase domain-containing protein.
    
 0.942
A0A1B0G2Y9
Protein kinase domain-containing protein.
    
 0.942
A0A1B0FAU6
RRM domain-containing protein.
   
0.934
A0A1B0FQW8
Uncharacterized protein.
   
 0.928
D3TN42_GLOMM
Alternative splicing factor SRP20/9G8.
  
0.928
A0A1B0FFE4
Uncharacterized protein.
   
 
 0.927
A0A1B0FFF1
MIF4G domain-containing protein.
   
 0.926
A0A1B0FQV4
Importin N-terminal domain-containing protein.
    
 
 0.924
Your Current Organism:
Glossina morsitans
NCBI taxonomy Id: 37546
Other names: G. morsitans morsitans, Glossina morsitans morsitans
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.