STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATD1Glutamine amidotransferase like class 1 domain containing 1. (141 aa)    
Predicted Functional Partners:
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.871
TNNI3
Troponin I3, cardiac type.
   
 0.865
TNNI1
Troponin I1, slow skeletal type.
   
 0.865
TNNI2
Troponin I2, fast skeletal type.
   
 0.865
ENSCAPP00000006875
annotation not available
   
 0.813
TPM2
Tropomyosin 2.
   
 0.813
ENSCAPP00000014012
annotation not available
   
 0.813
FBXO22
F-box protein 22.
   
 0.813
ENSCAPP00000015093
annotation not available
   
 0.813
MYL3
Myosin light chain 3.
   
 0.747
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.