Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000000022annotation not available (721 aa)    
Predicted Functional Partners:
BRD3
Bromodomain containing 3.
   
 
 0.983
BRD2
Bromodomain containing 2.
   
 
 0.976
CCNT2
Cyclin T2.
    
 0.966
ENSCAPP00000000596
annotation not available
    
 0.961
ENSCAPP00000007082
annotation not available
    
 0.961
BRDT
Bromodomain testis associated.
    
 
 0.959
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.958
EP300
E1A binding protein p300.
   
 0.954
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 0.949
NSD3
Nuclear receptor binding SET domain protein 3.
    
 0.947
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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