ENSCAPP00000000032 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000000032

annotation not available (590 aa)

Predicted Functional Partners:

MYD88

0.992

IRAK1

0.981

UNC93B1

0.977

ENSCAPP00000004229

0.972

TLR8

0.951

EIF4H

0.948

ENSCAPP00000011288

0.941

TRAF6

0.900

ENSCAPP00000013134

0.866

ENSCAPP00000014109

0.852

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF4H	ENSCAPP00000000032	ENSCAPP00000014674	ENSCAPP00000000032	Eukaryotic translation initiation factor 4H.	annotation not available	0.948
EIF4H	TLR8	ENSCAPP00000014674	ENSCAPP00000006716	Eukaryotic translation initiation factor 4H.	Toll like receptor 8.	0.823
ENSCAPP00000000032	EIF4H	ENSCAPP00000000032	ENSCAPP00000014674	annotation not available	Eukaryotic translation initiation factor 4H.	0.948
ENSCAPP00000000032	ENSCAPP00000004229	ENSCAPP00000000032	ENSCAPP00000004229	annotation not available	annotation not available	0.972
ENSCAPP00000000032	ENSCAPP00000011288	ENSCAPP00000000032	ENSCAPP00000011288	annotation not available	annotation not available	0.941
ENSCAPP00000000032	ENSCAPP00000013134	ENSCAPP00000000032	ENSCAPP00000013134	annotation not available	annotation not available	0.866
ENSCAPP00000000032	ENSCAPP00000014109	ENSCAPP00000000032	ENSCAPP00000014109	annotation not available	annotation not available	0.852
ENSCAPP00000000032	IRAK1	ENSCAPP00000000032	ENSCAPP00000017634	annotation not available	Interleukin 1 receptor associated kinase 1.	0.981
ENSCAPP00000000032	MYD88	ENSCAPP00000000032	ENSCAPP00000007987	annotation not available	MYD88 innate immune signal transduction adaptor.	0.992
ENSCAPP00000000032	TLR8	ENSCAPP00000000032	ENSCAPP00000006716	annotation not available	Toll like receptor 8.	0.951
ENSCAPP00000000032	TRAF6	ENSCAPP00000000032	ENSCAPP00000008546	annotation not available	TNF receptor associated factor 6.	0.900
ENSCAPP00000000032	UNC93B1	ENSCAPP00000000032	ENSCAPP00000012424	annotation not available	Unc-93 homolog B1, TLR signaling regulator.	0.977
ENSCAPP00000004229	ENSCAPP00000000032	ENSCAPP00000004229	ENSCAPP00000000032	annotation not available	annotation not available	0.972
ENSCAPP00000004229	ENSCAPP00000011288	ENSCAPP00000004229	ENSCAPP00000011288	annotation not available	annotation not available	0.757
ENSCAPP00000004229	ENSCAPP00000013134	ENSCAPP00000004229	ENSCAPP00000013134	annotation not available	annotation not available	0.994
ENSCAPP00000004229	ENSCAPP00000014109	ENSCAPP00000004229	ENSCAPP00000014109	annotation not available	annotation not available	0.519
ENSCAPP00000004229	IRAK1	ENSCAPP00000004229	ENSCAPP00000017634	annotation not available	Interleukin 1 receptor associated kinase 1.	0.998
ENSCAPP00000004229	MYD88	ENSCAPP00000004229	ENSCAPP00000007987	annotation not available	MYD88 innate immune signal transduction adaptor.	0.999
ENSCAPP00000004229	TLR8	ENSCAPP00000004229	ENSCAPP00000006716	annotation not available	Toll like receptor 8.	0.968
ENSCAPP00000004229	TRAF6	ENSCAPP00000004229	ENSCAPP00000008546	annotation not available	TNF receptor associated factor 6.	0.996