STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000000033annotation not available (60 aa)    
Predicted Functional Partners:
CBFB
Core-binding factor subunit beta.
    
 0.974
HDAC1
Histone deacetylase 1.
    
 0.953
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
    
 0.937
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
    
 0.924
HDAC2
Histone deacetylase 2.
    
 0.924
SPI1
Spi-1 proto-oncogene.
   
 0.918
TBX21
T-box transcription factor 21.
   
 0.912
EP300
E1A binding protein p300.
    
 0.911
CSF1R
Colony stimulating factor 1 receptor.
    
 0.910
CEBPE
CCAAT enhancer binding protein epsilon.
    
 0.904
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.