STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEAK1Pseudopodium enriched atypical kinase 1. (1640 aa)    
Predicted Functional Partners:
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.936
GRB2
Growth factor receptor bound protein 2.
    
 0.924
CRK
CRK proto-oncogene, adaptor protein.
    
 
 0.873
ENSCAPP00000000802
annotation not available
    
 
 0.863
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 
 0.863
ENSCAPP00000009903
annotation not available
    
   0.834
ENSCAPP00000017737
annotation not available
    
   0.834
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
   0.832
RND2
Rho family GTPase 2.
     
 0.786
STKLD1
Serine/threonine kinase like domain containing 1.
      
 0.760
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.