Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDHXPyruvate dehydrogenase complex component X. (338 aa)    
Predicted Functional Partners:
DLAT
Dihydrolipoamide S-acetyltransferase.
  
0.999
ENSCAPP00000003461
annotation not available
 
 0.999
PDHB
Pyruvate dehydrogenase E1 beta subunit.
 
 0.999
ENSCAPP00000006264
annotation not available
 
 0.998
ENSCAPP00000014746
annotation not available
 
 0.998
PDK1
Pyruvate dehydrogenase kinase 1.
    
 0.996
OGDH
Oxoglutarate dehydrogenase.
  
 0.996
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
 
 0.992
OGDHL
Oxoglutarate dehydrogenase like.
  
 0.991
PDK3
Pyruvate dehydrogenase kinase 3.
    
 0.989
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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