Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ACCS1-aminocyclopropane-1-carboxylate synthase homolog (inactive). (499 aa)    
Predicted Functional Partners:
AMD1
Adenosylmethionine decarboxylase 1.
     
 0.884
FBF1
Fas binding factor 1.
    
   0.842
ENSCAPP00000018675
annotation not available
    
 0.837
FLCN
Folliculin.
    
   0.831
SRM
Spermidine synthase.
   
 0.824
DDI1
DNA damage inducible 1 homolog 1.
    
 0.820
GLYR1
Glyoxylate reductase 1 homolog.
    
 0.813
MRPS5
Mitochondrial ribosomal protein S5.
    
 
 0.812
MAT1A
Methionine adenosyltransferase 1A.
  
 0.803
MAT2A
Methionine adenosyltransferase 2A.
  
 0.803
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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