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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACCS1-aminocyclopropane-1-carboxylate synthase homolog (inactive). (499 aa)    
Predicted Functional Partners:
FLCN
Folliculin.
    
   0.892
AMD1
Adenosylmethionine decarboxylase 1.
     
 0.864
ENSCAPP00000018675
annotation not available
    
 0.845
SRM
Spermidine synthase.
   
 0.829
DDI1
DNA damage inducible 1 homolog 1.
    
 0.827
MAT1A
Methionine adenosyltransferase 1A.
  
 0.817
MAT2A
Methionine adenosyltransferase 2A.
  
 0.817
MAT2B
Methionine adenosyltransferase 2B.
    
 0.809
THNSL2
Threonine synthase like 2.
  
 0.795
ADI1
Acireductone dioxygenase 1.
  
 
 0.774
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.