Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPRIN1Cell cycle associated protein 1. (608 aa)    
Predicted Functional Partners:
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.990
FXR1
FMR1 autosomal homolog 1.
   
 
 0.990
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.988
FXR2
FMR1 autosomal homolog 2.
   
 
 0.982
SPOP
Speckle type BTB/POZ protein.
    
 
 0.960
FMR1
FMRP translational regulator 1.
   
 
 0.936
STAU1
Staufen double-stranded RNA binding protein 1.
   
 
 0.922
USP10
Ubiquitin specific peptidase 10.
   
 
 0.921
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.899
SPOPL
Speckle type BTB/POZ protein like.
    
 
 0.898
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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