TBCA protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TBCA

Tubulin folding cofactor A. (130 aa)

Predicted Functional Partners:

TBCD

0.749

TUBB1

0.706

TUBB6

0.696

PFDN1

0.674

ENSCAPP00000001394

0.671

ENSCAPP00000009399

0.671

ENSCAPP00000016272

0.671

TUBB4A

0.666

ENSCAPP00000000321

0.665

TUBE1

0.664

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000321	ENSCAPP00000001394	ENSCAPP00000000321	ENSCAPP00000001394	annotation not available	annotation not available	0.467
ENSCAPP00000000321	ENSCAPP00000009399	ENSCAPP00000000321	ENSCAPP00000009399	annotation not available	annotation not available	0.467
ENSCAPP00000000321	ENSCAPP00000016272	ENSCAPP00000000321	ENSCAPP00000016272	annotation not available	annotation not available	0.466
ENSCAPP00000000321	TBCA	ENSCAPP00000000321	ENSCAPP00000000049	annotation not available	Tubulin folding cofactor A.	0.665
ENSCAPP00000000321	TBCD	ENSCAPP00000000321	ENSCAPP00000002151	annotation not available	Tubulin folding cofactor D.	0.530
ENSCAPP00000001394	ENSCAPP00000000321	ENSCAPP00000001394	ENSCAPP00000000321	annotation not available	annotation not available	0.467
ENSCAPP00000001394	TBCA	ENSCAPP00000001394	ENSCAPP00000000049	annotation not available	Tubulin folding cofactor A.	0.671
ENSCAPP00000001394	TBCD	ENSCAPP00000001394	ENSCAPP00000002151	annotation not available	Tubulin folding cofactor D.	0.539
ENSCAPP00000001394	TUBB1	ENSCAPP00000001394	ENSCAPP00000000296	annotation not available	Tubulin beta 1 class VI.	0.612
ENSCAPP00000001394	TUBB6	ENSCAPP00000001394	ENSCAPP00000018416	annotation not available	Tubulin beta 6 class V.	0.657
ENSCAPP00000009399	ENSCAPP00000000321	ENSCAPP00000009399	ENSCAPP00000000321	annotation not available	annotation not available	0.467
ENSCAPP00000009399	TBCA	ENSCAPP00000009399	ENSCAPP00000000049	annotation not available	Tubulin folding cofactor A.	0.671
ENSCAPP00000009399	TBCD	ENSCAPP00000009399	ENSCAPP00000002151	annotation not available	Tubulin folding cofactor D.	0.539
ENSCAPP00000009399	TUBB1	ENSCAPP00000009399	ENSCAPP00000000296	annotation not available	Tubulin beta 1 class VI.	0.612
ENSCAPP00000009399	TUBB6	ENSCAPP00000009399	ENSCAPP00000018416	annotation not available	Tubulin beta 6 class V.	0.657
ENSCAPP00000016272	ENSCAPP00000000321	ENSCAPP00000016272	ENSCAPP00000000321	annotation not available	annotation not available	0.466
ENSCAPP00000016272	TBCA	ENSCAPP00000016272	ENSCAPP00000000049	annotation not available	Tubulin folding cofactor A.	0.671
ENSCAPP00000016272	TBCD	ENSCAPP00000016272	ENSCAPP00000002151	annotation not available	Tubulin folding cofactor D.	0.539
ENSCAPP00000016272	TUBB1	ENSCAPP00000016272	ENSCAPP00000000296	annotation not available	Tubulin beta 1 class VI.	0.915
ENSCAPP00000016272	TUBB6	ENSCAPP00000016272	ENSCAPP00000018416	annotation not available	Tubulin beta 6 class V.	0.657