STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD9CD9 molecule. (143 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
   
 0.989
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.986
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.985
ENSCAPP00000005186
annotation not available
   
 
 0.979
ITGA6
Integrin subunit alpha 6.
    
 0.969
ITGA3
Integrin subunit alpha 3.
    
 0.963
ADAM10
ADAM metallopeptidase domain 10.
    
 0.947
CD151
CD151 molecule (Raph blood group).
    
 0.932
ENSCAPP00000009388
annotation not available
   
 
 0.906
TSG101
Tumor susceptibility 101.
    
 
 0.894
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.