STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N4BP3NEDD4 binding protein 3. (541 aa)    
Predicted Functional Partners:
GID8
GID complex subunit 8 homolog.
    
 0.949
WDR26
WD repeat domain 26.
   
 0.942
ENSCAPP00000002740
annotation not available
    
 0.884
ENSCAPP00000017829
annotation not available
    
 0.877
RANBP10
RAN binding protein 10.
   
 0.872
ENSCAPP00000003934
annotation not available
   
 0.872
MKLN1
Muskelin 1.
    
 0.835
MAEA
Macrophage erythroblast attacher.
    
 0.834
SPRYD3
SPRY domain containing 3.
   
 0.794
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 0.712
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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