Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC151Coiled-coil domain containing 151. (499 aa)    
Predicted Functional Partners:
ENSCAPP00000015156
annotation not available
   
 0.991
TTC25
Tetratricopeptide repeat domain 25.
   
 0.989
ARMC4
Armadillo repeat containing 4.
    
 0.988
ENSCAPP00000007846
annotation not available
   
 0.970
IFT46
Intraflagellar transport 46.
    
 
 0.960
ENSCAPP00000001832
annotation not available
    
  0.958
CCDC40
Coiled-coil domain containing 40.
    
 0.954
ENSCAPP00000014595
annotation not available
    
   0.952
IFT81
Intraflagellar transport 81.
    
   0.947
ENSCAPP00000006959
annotation not available
    
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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