STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A. (512 aa)    
Predicted Functional Partners:
MRPS6
Mitochondrial ribosomal protein S6.
    
   0.751
ACBD3
acyl-CoA binding domain containing 3.
    
 
 0.674
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.644
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.644
MRPL21
Mitochondrial ribosomal protein L21.
    
 
 0.597
ENSCAPP00000013732
annotation not available
    
 
 0.597
RAB9A
RAB9A, member RAS oncogene family.
    
 
 0.582
MRPL33
Mitochondrial ribosomal protein L33.
    
   0.569
ENSCAPP00000006634
annotation not available
    
   0.569
ENSCAPP00000011294
annotation not available
    
   0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.