Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000000069annotation not available (91 aa)    
Predicted Functional Partners:
SNU13
Small nuclear ribonucleoprotein 13.
   
    0.916
UTP15
UTP15 small subunit processome component.
   
    0.912
ENSCAPP00000005173
annotation not available
     
 0.908
GART
annotation not available
   
 0.901
MTHFD2
annotation not available
    
 0.876
NIPSNAP2
Nipsnap homolog 2.
   
    0.859
ENSCAPP00000007368
annotation not available
   
    0.859
ENSCAPP00000012618
annotation not available
   
    0.859
NIPSNAP1
Nipsnap homolog 1.
   
    0.859
ASF1B
Anti-silencing function 1B histone chaperone.
   
    0.821
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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