STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNIP1TNFAIP3 interacting protein 1. (662 aa)    
Predicted Functional Partners:
ENSCAPP00000004807
annotation not available
   
 0.979
TNF
Tumor necrosis factor.
    
 
 0.946
ENSCAPP00000015096
annotation not available
    
 0.828
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.694
OTUD7B
OTU deubiquitinase 7B.
    
 0.681
OTUD7A
OTU deubiquitinase 7A.
    
 0.681
ZRANB1
Zinc finger RANBP2-type containing 1.
    
 0.681
VCPIP1
Valosin containing protein interacting protein 1.
    
 0.681
NFKB2
Nuclear factor kappa B subunit 2.
   
 
 0.633
TNFRSF25
TNF receptor superfamily member 25.
    
   0.608
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.