STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATTyrosine aminotransferase. (491 aa)    
Predicted Functional Partners:
GOT2
Glutamic-oxaloacetic transaminase 2.
  
 0.961
GOT1
Glutamic-oxaloacetic transaminase 1.
  
 0.959
HPD
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.955
MAT1A
Methionine adenosyltransferase 1A.
  
 0.944
MAT2A
Methionine adenosyltransferase 2A.
  
 0.944
ADI1
Acireductone dioxygenase 1.
  
 
 0.937
TH
Tyrosine hydroxylase.
   
 
 0.930
BHMT
Betaine--homocysteine S-methyltransferase.
  
 
 0.923
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 
 0.921
BHMT2
Betaine--homocysteine S-methyltransferase 2.
  
 
 0.921
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.