STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC6ATrafficking protein particle complex 6A. (131 aa)    
Predicted Functional Partners:
TRAPPC5
Trafficking protein particle complex 5.
    
 0.999
TRAPPC9
Trafficking protein particle complex 9.
   
 0.999
TRAPPC1
Trafficking protein particle complex 1.
   
 0.999
TRAPPC11
Trafficking protein particle complex 11.
   
 0.999
TRAPPC2L
Trafficking protein particle complex 2 like.
   
 0.999
ENSCAPP00000011394
annotation not available
    
 0.999
ENSCAPP00000017935
annotation not available
   
 0.999
TRAPPC12
Trafficking protein particle complex 12.
    
 0.997
ENSCAPP00000007397
annotation not available
   
 0.994
TRAPPC13
Trafficking protein particle complex 13.
   
 0.993
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.