Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNEP1R1CTD nuclear envelope phosphatase 1 regulatory subunit 1. (79 aa)    
Predicted Functional Partners:
CTDNEP1
CTD nuclear envelope phosphatase 1.
   
 0.982
LPIN1
Lipin 1.
     
 0.687
LPIN2
Lipin 2.
     
 0.626
LPIN3
Lipin 3.
     
 0.626
BRINP1
BMP/retinoic acid inducible neural specific 1.
      
 0.614
UBLCP1
Ubiquitin like domain containing CTD phosphatase 1.
   
 0.577
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
      
 0.572
CTDSP1
CTD small phosphatase 1.
    
 0.570
ENSCAPP00000006737
annotation not available
    
 0.570
CTDSPL2
CTD small phosphatase like 2.
    
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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