DDX54 protein (Cavia aperea) - STRING interaction network

Nodes:

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Cooccurrence

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Experiments

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[Homology]

Score

DDX54

DEAD-box helicase 54. (851 aa)

Predicted Functional Partners:

BOP1

0.997

FTSJ3

0.996

NOC2L

0.995

DDX55

0.994

DDX27

0.993

GTPBP4

0.992

ENSCAPP00000003292

0.991

RRP1

0.991

ENSCAPP00000010755

0.991

GNL2

0.991

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOP1	DDX27	ENSCAPP00000002700	ENSCAPP00000009324	BOP1 ribosomal biogenesis factor.	DEAD-box helicase 27.	0.998
BOP1	DDX54	ENSCAPP00000002700	ENSCAPP00000001001	BOP1 ribosomal biogenesis factor.	DEAD-box helicase 54.	0.997
BOP1	DDX55	ENSCAPP00000002700	ENSCAPP00000002308	BOP1 ribosomal biogenesis factor.	DEAD-box helicase 55.	0.998
BOP1	ENSCAPP00000003292	ENSCAPP00000002700	ENSCAPP00000003292	BOP1 ribosomal biogenesis factor.	annotation not available	0.997
BOP1	ENSCAPP00000010755	ENSCAPP00000002700	ENSCAPP00000010755	BOP1 ribosomal biogenesis factor.	annotation not available	0.997
BOP1	FTSJ3	ENSCAPP00000002700	ENSCAPP00000016842	BOP1 ribosomal biogenesis factor.	FtsJ RNA 2'-O-methyltransferase 3.	0.999
BOP1	GNL2	ENSCAPP00000002700	ENSCAPP00000017947	BOP1 ribosomal biogenesis factor.	G protein nucleolar 2.	0.999
BOP1	GTPBP4	ENSCAPP00000002700	ENSCAPP00000001224	BOP1 ribosomal biogenesis factor.	GTP binding protein 4.	0.999
BOP1	NOC2L	ENSCAPP00000002700	ENSCAPP00000004318	BOP1 ribosomal biogenesis factor.	NOC2 like nucleolar associated transcriptional repressor.	0.999
BOP1	RRP1	ENSCAPP00000002700	ENSCAPP00000006398	BOP1 ribosomal biogenesis factor.	Ribosomal RNA processing 1.	0.999
DDX27	BOP1	ENSCAPP00000009324	ENSCAPP00000002700	DEAD-box helicase 27.	BOP1 ribosomal biogenesis factor.	0.998
DDX27	DDX54	ENSCAPP00000009324	ENSCAPP00000001001	DEAD-box helicase 27.	DEAD-box helicase 54.	0.993
DDX27	DDX55	ENSCAPP00000009324	ENSCAPP00000002308	DEAD-box helicase 27.	DEAD-box helicase 55.	0.986
DDX27	ENSCAPP00000003292	ENSCAPP00000009324	ENSCAPP00000003292	DEAD-box helicase 27.	annotation not available	0.992
DDX27	ENSCAPP00000010755	ENSCAPP00000009324	ENSCAPP00000010755	DEAD-box helicase 27.	annotation not available	0.992
DDX27	FTSJ3	ENSCAPP00000009324	ENSCAPP00000016842	DEAD-box helicase 27.	FtsJ RNA 2'-O-methyltransferase 3.	0.996
DDX27	GNL2	ENSCAPP00000009324	ENSCAPP00000017947	DEAD-box helicase 27.	G protein nucleolar 2.	0.993
DDX27	GTPBP4	ENSCAPP00000009324	ENSCAPP00000001224	DEAD-box helicase 27.	GTP binding protein 4.	0.995
DDX27	NOC2L	ENSCAPP00000009324	ENSCAPP00000004318	DEAD-box helicase 27.	NOC2 like nucleolar associated transcriptional repressor.	0.996
DDX27	RRP1	ENSCAPP00000009324	ENSCAPP00000006398	DEAD-box helicase 27.	Ribosomal RNA processing 1.	0.980