Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPNA3Karyopherin subunit alpha 3. (432 aa)    
Predicted Functional Partners:
KPNA4
Karyopherin subunit alpha 4.
   
 0.999
KPNB1
Karyopherin subunit beta 1.
   
 0.998
ENSCAPP00000015456
annotation not available
    
  0.990
NFKB1
Nuclear factor kappa B subunit 1.
    
  0.977
ENSCAPP00000009156
annotation not available
   
 0.965
ENSCAPP00000017855
annotation not available
    
 
 0.961
ENSCAPP00000018284
annotation not available
   
 0.957
RCC1
Regulator of chromosome condensation 1.
   
 
 0.954
KPNA7
Karyopherin subunit alpha 7.
    
  0.951
ENSCAPP00000015628
annotation not available
   
 0.943
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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