STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001007annotation not available (210 aa)    
Predicted Functional Partners:
FANCD2
FA complementation group D2.
    
 0.999
FANCL
FA complementation group L.
    
 0.999
ENSCAPP00000009121
annotation not available
   
 0.999
ENSCAPP00000016289
annotation not available
    
 0.999
ENSCAPP00000009516
annotation not available
    
 0.998
RPL8
Ribosomal protein L8.
  
 0.997
ENSCAPP00000007864
annotation not available
    
 0.997
RPL30
Ribosomal protein L30.
   
 0.997
RPL5
Ribosomal protein L5.
  
 0.997
RPL31
Ribosomal protein L31.
  
 0.997
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.