STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001012annotation not available (200 aa)    
Predicted Functional Partners:
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.968
TRAF6
TNF receptor associated factor 6.
    
 0.835
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.814
USP15
Ubiquitin specific peptidase 15.
  
 
 
0.775
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.725
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.708
ENSCAPP00000010366
annotation not available
    
  0.708
ENSCAPP00000009473
annotation not available
    
 
 0.701
ENSCAPP00000008686
annotation not available
    
 0.689
TRIM21
Tripartite motif containing 21.
    
 
 0.679
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.