STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF23PHD finger protein 23. (390 aa)    
Predicted Functional Partners:
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.903
MCRS1
Microspherule protein 1.
    
 0.873
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.790
TEX30
Testis expressed 30.
    
 0.790
ENSCAPP00000018476
annotation not available
    
 0.767
ENSCAPP00000015921
annotation not available
    
 0.763
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.757
SIN3B
SIN3 transcription regulator family member B.
    
 0.748
SIN3A
SIN3 transcription regulator family member A.
    
 0.741
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.740
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.