Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001021annotation not available (84 aa)    
Predicted Functional Partners:
ENSCAPP00000016641
annotation not available
    
 0.995
THOC7
THO complex 7.
    
 0.991
POLDIP3
DNA polymerase delta interacting protein 3.
    
 0.990
DDX39B
DExD-box helicase 39B.
    
 0.988
ENSCAPP00000009016
annotation not available
   
 0.984
THOC1
THO complex 1.
    
 0.977
NCBP3
Nuclear cap binding subunit 3.
   
 
 0.974
ENSCAPP00000008334
annotation not available
    
 0.965
CHTOP
Chromatin target of PRMT1.
   
 0.954
DDX39A
DExD-box helicase 39A.
    
 0.951
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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