Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001031annotation not available (116 aa)    
Predicted Functional Partners:
WASHC1
WASH complex subunit 1.
    
 0.999
WASHC4
WASH complex subunit 4.
    
 0.999
WASHC5
WASH complex subunit 5.
    
 0.999
ENSCAPP00000015841
annotation not available
    
 0.998
HSBP1L1
Heat shock factor binding protein 1 like 1.
    
 0.990
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.985
SNX27
Sorting nexin 27.
    
 0.984
RCSD1
RCSD domain containing 1.
     
  0.947
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
    
 0.945
ENSCAPP00000012968
annotation not available
    
 0.922
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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