STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001035annotation not available (320 aa)    
Predicted Functional Partners:
ENSCAPP00000017228
annotation not available
 
0.962
NFKB1
Nuclear factor kappa B subunit 1.
    
 0.874
NFKB2
Nuclear factor kappa B subunit 2.
    
 0.873
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.861
ENSCAPP00000016597
annotation not available
    
 0.850
ENSCAPP00000006439
annotation not available
     
 0.849
ENSCAPP00000012909
annotation not available
     
 0.849
REL
REL proto-oncogene, NF-kB subunit.
    
  0.849
ENSCAPP00000015456
annotation not available
    
  0.849
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.835
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.