STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KATNB1Katanin regulatory subunit B1. (655 aa)    
Predicted Functional Partners:
KATNA1
Katanin catalytic subunit A1.
   
 0.997
KATNAL1
Katanin catalytic subunit A1 like 1.
   
 0.995
KATNBL1
Katanin regulatory subunit B1 like 1.
    
 0.981
ENSCAPP00000017181
annotation not available
   
 0.971
WDR82
WD repeat domain 82.
   
 
 
0.762
PSMC5
Proteasome 26S subunit, ATPase 5.
   
 0.753
ENSCAPP00000002344
annotation not available
    
 0.746
ENSCAPP00000003315
annotation not available
    
 0.746
PSMC2
Proteasome 26S subunit, ATPase 2.
    
 0.746
ENSCAPP00000010523
annotation not available
    
 0.746
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.