Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUBBTubulin beta class I. (298 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 0.795
CCT2
Chaperonin containing TCP1 subunit 2.
   
 0.733
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.690
TBCA
Tubulin folding cofactor A.
   
 0.675
ENSCAPP00000017181
annotation not available
    
 0.670
DYNLRB2
Dynein light chain roadblock-type 2.
    
  0.657
DYNLRB1
Dynein light chain roadblock-type 1.
    
  0.657
ENSCAPP00000001646
annotation not available
    
  0.655
DYNLT1
Dynein light chain Tctex-type 1.
    
  0.655
TONSL
Tonsoku like, DNA repair protein.
    
 0.637
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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