STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001054annotation not available (103 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.926
ENSCAPP00000006614
annotation not available
   
 0.919
ENSCAPP00000017678
annotation not available
 
      0.899
ENSCAPP00000010593
annotation not available
 
      0.873
DHX9
DExH-box helicase 9.
   
 0.869
ENSCAPP00000003691
annotation not available
   
 0.851
ENSCAPP00000014392
annotation not available
   
 0.851
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.849
A1CF
APOBEC1 complementation factor.
 
  
   0.836
ENSCAPP00000010711
annotation not available
 
      0.829
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.