STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST9Carbohydrate sulfotransferase 9. (365 aa)    
Predicted Functional Partners:
B4GALNT4
beta-1,4-N-acetyl-galactosaminyltransferase 4.
     
 0.808
B4GALNT3
beta-1,4-N-acetyl-galactosaminyltransferase 3.
     
 0.808
CHST8
Carbohydrate sulfotransferase 8.
  
  
 
0.803
CHST11
Carbohydrate sulfotransferase 11.
  
  
 
0.671
CSPG4
Chondroitin sulfate proteoglycan 4.
    
  0.448
TTC32
Tetratricopeptide repeat domain 32.
      
 0.429
PALD1
Phosphatase domain containing paladin 1.
      
 0.406
B3GAT3
Beta-1,3-glucuronyltransferase 3.
     
 0.401
B3GAT1
Beta-1,3-glucuronyltransferase 1.
     
 0.401
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.