STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST9Carbohydrate sulfotransferase 9. (365 aa)    
Predicted Functional Partners:
CHST8
Carbohydrate sulfotransferase 8.
    
  0.923
B4GALNT4
beta-1,4-N-acetyl-galactosaminyltransferase 4.
     
 0.913
B4GALNT3
beta-1,4-N-acetyl-galactosaminyltransferase 3.
     
 0.913
CANX
Calnexin.
    
 
 0.811
CHST15
Carbohydrate sulfotransferase 15.
      
 0.684
ENSCAPP00000001689
annotation not available
    
   0.675
ENSCAPP00000013136
annotation not available
     
  0.641
LRP6
LDL receptor related protein 6.
    
   0.622
ENSCAPP00000009641
annotation not available
    
  0.619
ISLR
Immunoglobulin superfamily containing leucine rich repeat.
    
  0.619
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.