STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC5A1Solute carrier family 5 member 1. (571 aa)    
Predicted Functional Partners:
PDZK1IP1
PDZK1 interacting protein 1.
    
   0.759
TMPRSS15
Transmembrane serine protease 15.
   
  
 0.623
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
     
 0.620
ENSCAPP00000011650
annotation not available
   
  
 0.570
TREH
Trehalase.
     
 0.565
SLC13A2
Solute carrier family 13 member 2.
     
 0.550
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.536
ENSCAPP00000001667
annotation not available
  
  
 0.535
ENSCAPP00000004246
annotation not available
  
  
 0.535
EGFR
Epidermal growth factor receptor.
    
 
 0.526
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.