STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC5A1Solute carrier family 5 member 1. (571 aa)    
Predicted Functional Partners:
TREH
Trehalase.
     
 0.852
PDZK1IP1
PDZK1 interacting protein 1.
    
 
 0.836
ENSCAPP00000011650
annotation not available
      
 0.730
SLC2A5
Solute carrier family 2 member 5.
   
  
 0.652
TMPRSS15
Transmembrane serine protease 15.
   
  
 0.642
TAS1R3
Taste 1 receptor member 3.
      
 0.623
TAS1R2
Taste 1 receptor member 2.
      
 0.622
ENSCAPP00000003046
annotation not available
      
 0.604
RPL4
Ribosomal protein L4.
     
 0.590
ENSCAPP00000006121
annotation not available
  
  
 0.575
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.