Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001079annotation not available (134 aa)    
Predicted Functional Partners:
ACACB
acetyl-CoA carboxylase beta.
   
 0.678
ACACA
acetyl-CoA carboxylase alpha.
   
 0.678
VCP
Valosin containing protein.
   
 0.650
ENSCAPP00000005172
annotation not available
 
  
 0.646
ABCB10
ATP binding cassette subfamily B member 10.
 
  
 0.638
ABCB9
ATP binding cassette subfamily B member 9.
 
  
 0.630
TP53
Tumor protein p53.
    
 0.617
ENSCAPP00000002045
annotation not available
     
 0.616
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
  0.610
HIP1
Huntingtin interacting protein 1.
    
 0.606
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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