Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLIT3Slit guidance ligand 3. (1352 aa)    
Predicted Functional Partners:
ROBO2
Roundabout guidance receptor 2.
   
 0.996
ROBO4
Roundabout guidance receptor 4.
   
 0.993
ENSCAPP00000004646
annotation not available
   
 0.985
ENSCAPP00000012111
annotation not available
   
 0.985
ROBO3
Roundabout guidance receptor 3.
    
 0.899
ABL2
ABL proto-oncogene 2, non-receptor tyrosine kinase.
    
  0.714
ABL1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
    
  0.714
SRGAP1
SLIT-ROBO Rho GTPase activating protein 1.
     
 0.706
GDNF
Glial cell derived neurotrophic factor.
     
 0.697
DCC
DCC netrin 1 receptor.
    
 0.683
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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