STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3BRAB3B, member RAS oncogene family. (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.996
SYT1
Synaptotagmin 1.
   
 0.770
SYT2
Synaptotagmin 2.
   
 0.759
SNAP25
Synaptosome associated protein 25.
   
 0.747
ENSCAPP00000011144
annotation not available
    
 0.721
SYT11
Synaptotagmin 11.
   
 0.697
SYT4
Synaptotagmin 4.
   
 0.697
GDI1
GDP dissociation inhibitor 1.
   
 0.681
GDI2
GDP dissociation inhibitor 2.
   
 0.681
RIMS3
Regulating synaptic membrane exocytosis 3.
    
 0.674
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.