Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001101annotation not available (416 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.996
ITSN1
Intersectin 1.
    
 0.962
ENSCAPP00000013032
annotation not available
    
 0.962
TSG101
Tumor susceptibility 101.
    
 0.931
WASL
WASP like actin nucleation promoting factor.
    
 0.922
WAS
WASP actin nucleation promoting factor.
    
 0.922
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 
 0.907
AFF1
AF4/FMR2 family member 1.
    
 
 0.893
GAK
Cyclin G associated kinase.
   
 0.888
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 0.881
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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