STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HID1HID1 domain containing. (766 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
   
 
 0.890
NUP214
Nucleoporin 214.
    
 
 0.857
CSDE1
Cold shock domain containing E1.
    
   0.841
USP7
Ubiquitin specific peptidase 7.
    
 
 0.831
USP40
Ubiquitin specific peptidase 40.
    
 
 0.831
ENSCAPP00000018144
annotation not available
    
   0.831
RAE1
Ribonucleic acid export 1.
    
 
 0.823
NUP62
Nucleoporin 62.
    
   0.788
NUP155
Nucleoporin 155.
    
 
 0.783
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
    
   0.698
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.